April 28, 2024
Khodakaram Salimifard

Khodakaram Salimifard

Academic Rank: Associate professor
Address: Industrial Management Department, Business & Economics School, Persian Gulf University, Bushehr 75169
Degree: Ph.D in Operations Research
Phone: 07731222118
Faculty: School of Business and Economics

Research

Title Machine learning algorithms to uncover risk factors of breast cancer: insights from a large case-control study
Type Article
Keywords
breast cancer, machine learning, risk factor, random forest, neural networks, bootstrap aggregating classification and regression tree, extreme gradient boosting
Journal Frontiers in Oncology
DOI https://doi.org/10.3389/fonc.2023.1276232
Researchers Mostafa Dianati-Nasab (First researcher) , Khodakaram Salimifard (Second researcher) , Reza Mohammadi (Third researcher) , Sara Saadatmand (Fourth researcher) , Mohammad Fararouei (Fifth researcher) , Behshid Jiavid-Sharifi (Not in first six researchers) , Kosar S. Hosseini (Not in first six researchers) , Thierry Chaussalet (Not in first six researchers) , Samira Dehdar (Not in first six researchers)

Abstract

Introduction: This large case-control study explored the application of machine learning models to identify risk factors for primary invasive incident breast cancer (BC) in the Iranian population. This study serves as a bridge toward improved BC prevention, early detection, and management through the identification of modifiable and unmodifiable risk factors. Methods: The dataset includes 1,009 cases and 1,009 controls, with comprehensive data on lifestyle, health-behavior, reproductive and sociodemographic factors. Different machine learning models, namely Random Forest (RF), Neural Networks (NN), Bootstrap Aggregating Classification and Regression Trees (Bagged CART), and Extreme Gradient Boosting Tree (XGBoost), were employed to analyze the data. Results: The findings highlight the significance of a chest X-ray history, deliberate weight loss, abortion history, and post-menopausal status as predictors. Factors such as second-hand smoking, lower education, menarche age (>14), occupation (employed), first delivery age (18-23), and breastfeeding duration (>42 months) were also identified as important predictors in multiple models. The RF model exhibited the highest Area Under the Curve (AUC) value of 0.9, as indicated by the Receiver Operating Characteristic (ROC) curve. Following closely was the Bagged CART model with an AUC of 0.89, while the XGBoost model achieved a slightly lower AUC of 0.78. In contrast, the NN model demonstrated the lowest AUC of 0.74. On the other hand, the RF model achieved an accuracy of 83.9% and a Kappa coefficient of 67.8% and the XGBoost, achieved a lower accuracy of 82.5% and a lower Kappa coefficient of 0.6. Conclusion: This study could be beneficial for targeted preventive measures according to the main risk factors for BC among high-risk women.